Lab Resource

Databases developed by the group:

  • ChIP-Hub: an integrative web-based/Shiny application for exploring plant regulome.
  • CAP: Citrus sinensis annotation project: a comprehensive database for sweet orange genome.
  • PlantNATsDB: a comprehensive database of plant natural antisense transcripts.

Web services developed by the group:

  • ChIP-Hub: an integrative web-based/Shiny application for exploring plant regulome.
  • HTPmod: a web-based platform for modeling and visualization of large-scale biological data.

Source code provided by the group:

  • HTPmod Shiny App: a web-based platform for modeling and visualization of large-scale biological data.
  • HTPmod: an R package for predicting plant biomass accumulation based on image-derived parameters.
  • PlantGRNs: integration of genome-wide TF binding and expression data to characterize plant gene regulatory networks.
  • IAPmod: modeling crop plant growth and drought responses based on high-throughput image analysis.

The following files are available from the group website:

Contact

School of Life Sciences, Nanjing University
Nanjing 210023, China

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